PPDB

The Plant Proteome Database

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AT4G32915.1   glutamyl-tRNA(Gln) amidotransferase subunit C

Lab Annot. Glu-tRNA(Gln) amidotransferase subunit C (GATA or GLU-ADT subunit C) - dual targeted mito & plastid
Mapman: 29.1.50* protein.aa activation.glutamate-tRNA amidotransferase
Curated Location mitochondria (Pubmed: 23198870 18441100 )
plastid stroma (Pubmed: 23198870 18441100 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g44820.1 7Oryza sativa5E-389663791 (1)C
v1_GRMZM2G136889_P01 4a53Zea mays6E-38125497226 (26)C
Zm00001eb218450_P001 agpv5Zea mays6E-3812549720 (0)C
GRMZM2G136889_P01 3.21Zea mays6E-38125497228 (28)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glu-tRNAGln(1)
TargetP: Chloroplast (Class 3 C0.856; M0.263; S0.005; _0.018)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 155 aa (-cTP 144)
Molecular Weight 17.52 kDA(-cTP 16.32)
PI 7.71(-cTP 6.97)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1459Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 2)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1596Detail        [A. thaliana]  
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2031Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2032Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2034Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2035Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2038Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2039Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2050Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2051Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2065Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2075Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2080Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2144Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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