PPDB

The Plant Proteome Database

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AT4G32910.1   nuclear pore complex Nup85-like protein

Lab Annot. Nucleoporin Nup75
Mapman: 29.3.1 protein.targeting.nucleus
Curated Location nucleus (Pubmed: 21189294 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os01g54240.1 7Oryza sativa073357740 (0)_
Os01g54240.2 7Oryza sativa058961790 (0)S
GRMZM2G409430_P02 3.21Zea mays073954731 (1)_
Zm00001eb152980_P003 agpv5Zea mays073954730 (0)_
Zm00001eb152980_P002 agpv5Zea mays073954730 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nucleopor_Nup85(1)
TargetP: Cytoplasm (Class 2 C0.143; M0.193; S0.023; _0.837)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 716 aa (-cTP 666)
Molecular Weight 80.85 kDA(-cTP )
PI 6.13(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


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