PPDB

PPDB	The Plant Proteome Database

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AT4G32600.1 C3H4 type zinc finger protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G32600.2 11 Arabidopsis thaliana 0 453 100 100 0 (0) M
AT1G80400.1 11 Arabidopsis thaliana 1E-140 364 54 71 0 (0) _
AT4G26580.1 11 Arabidopsis thaliana 6E-46 305 34 50 0 (0) C
Os02g54624.1 7 Oryza sativa 4E-149 380 57 70 0 (0) _
Os05g08610.4 7 Oryza sativa 2E-134 330 59 71 0 (0) _
Os05g08610.1 7 Oryza sativa 2E-134 330 59 71 0 (0) _
v1_GRMZM2G089466_P01 4a53 Zea mays 2E-146 386 55 68 0 (0) _
Zm00001eb257360_P003 agpv5 Zea mays 2E-146 386 55 68 0 (0) _
Zm00001eb257360_P005 agpv5 Zea mays 2E-146 386 55 68 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3
TargetP:	Mitochondria (Class 5 C0.069; M0.607; S0.001; _0.456)
Predotar:
Subcel. Location:
TM-HMM prediction:	4 TMs
Aramemnon:	4 TMs
TAT position:
Length	453 aa (-cTP 432)
Molecular Weight	49.91 kDA(-cTP )
PI	7.85(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data