PPDB

The Plant Proteome Database

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AT4G32600.1   C3H4 type zinc finger protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G32600.2 11Arabidopsis thaliana04531001000 (0)M
AT1G80400.1 11Arabidopsis thaliana1E-14036454710 (0)_
AT4G26580.1 11Arabidopsis thaliana6E-4630534500 (0)C
Os02g54624.1 7Oryza sativa4E-14938057700 (0)_
Os05g08610.4 7Oryza sativa2E-13433059710 (0)_
Os05g08610.1 7Oryza sativa2E-13433059710 (0)_
v1_GRMZM2G089466_P01 4a53Zea mays2E-14638655680 (0)_
Zm00001eb257360_P003 agpv5Zea mays2E-14638655680 (0)_
Zm00001eb257360_P005 agpv5Zea mays2E-14638655680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FANCL_C(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3
TargetP: Mitochondria (Class 5 C0.069; M0.607; S0.001; _0.456)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 453 aa (-cTP 432)
Molecular Weight 49.91 kDA(-cTP )
PI 7.85(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data


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