PPDB

The Plant Proteome Database

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AT4G32420.1   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Lab Annot. Cyclophilin-like peptidyl-prolyl cis-trans isomerase
Mapman: 31.3.1 cell.cycle.peptidylprolyl isomerase
Curated Location nucleus (Pubmed: 15166240 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G32420.5 11Arabidopsis thaliana08371001000 (0)_
AT4G32420.6 11Arabidopsis thaliana08371001000 (0)_
AT4G32420.3 11Arabidopsis thaliana08371001003 (3)_
Os02g10970.3 7Oryza sativa2E-6622255660 (0)_
Os02g10970.1 7Oryza sativa2E-6622255660 (0)_
Os07g08190.1 7Oryza sativa1E-6018354695 (5)S
GRMZM2G070807_P04 3.21Zea mays2E-6222248640 (0)_
v1_GRMZM2G070807_P04 4a53Zea mays2E-6222248649 (9)_
Zm00001eb301310_P003 agpv5Zea mays8E-6122248640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pro_isomerase(1)
TargetP: Cytoplasm (Class 2 C0.151; M0.040; S0.194; _0.817)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 837 aa (-cTP 768)
Molecular Weight 94.63 kDA(-cTP )
PI 11.93(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1416Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.2 clpr2-1
2223Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))
18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help