PPDB

 The Plant Proteome Database

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AT4G32380.1   pectin lyase superfamily protein
Lab Annot.
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G32380.2 11Arabidopsis thaliana045390900 (0)S
AT4G32375.1 11Arabidopsis thaliana7E-13834158690 (0)_
AT4G32370.1 11Arabidopsis thaliana1E-12332056720 (0)S
Os07g10740.1 7Oryza sativa2E-7238134520 (0)S
Os07g10680.1 7Oryza sativa3E-7132237570 (0)S
Os05g46510.1 7Oryza sativa3E-7038534510 (0)S
GRMZM5G831200_P01 3.21Zea mays7E-7037833510 (0)S
Zm00001eb231160_P001 agpv5Zea mays7E-7037833510 (0)S
Zm00001eb061780_P001 agpv5Zea mays8E-7034834550 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_28(1)
TargetP: Secreted (Class 4 C0.079; M0.074; S0.453; _0.210)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 453 aa (-cTP 400)
Molecular Weight 49.27 kDA(-cTP )
PI 7.91(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help