PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G32130.1 ER membrane protein complex subunit-like protein (DUF2012)

Lab Annot.

carbohydrate binding
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G25310.1 11 Arabidopsis thaliana 2E-111 204 81 89 11 (7) S
Os06g43650.2 7 Oryza sativa 4E-85 174 68 81 17 (17) S
Os06g43650.1 7 Oryza sativa 3E-74 178 61 75 0 (0) S
GRMZM2G169184_P01 3.21 Zea mays 2E-86 173 71 83 29 (29) S
v1_GRMZM2G169184_P01 4a53 Zea mays 2E-86 173 71 83 22 (21) S
Zm00001eb275230_P001 agpv5 Zea mays 2E-86 173 71 83 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CarbopepD_reg_2(1) CarboxypepD_reg(1) DUF2012(1) fn3_3(1) SOP4(2)
TargetP:	Secreted (Class 1 C0.068; M0.018; S0.972; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	1 TMs
TAT position:
Length	202 aa (-cTP 159)
Molecular Weight	22.56 kDA(-cTP )
PI	9.47(-cTP )

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data