PPDB

 The Plant Proteome Database

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AT4G31980.1   PPPDE thiol peptidase family protein
Lab Annot. PPPDE putative thiol peptidase; deSUMOylation/deubiquination
Mapman: 29.5.3.5.1* protein.degradation.cysteine protease.CP.C97
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G11290.2 11Arabidopsis thaliana1E-16342658710 (0)_
AT5G11290.1 11Arabidopsis thaliana4E-12735755700 (0)M
AT2G25190.1 11Arabidopsis thaliana7E-9318276850 (0)M
Os03g01130.1 7Oryza sativa4E-6114460770 (0)C
Os03g01130.2 7Oryza sativa5E-6114460770 (0)C
Os03g10200.1 7Oryza sativa2E-6018554680 (0)M
v1_GRMZM2G005435_P02 4a53Zea mays3E-6018554680 (0)M
Zm00001eb400970_P001 agpv5Zea mays3E-6018554680 (0)M
Zm00001eb400970_P004 agpv5Zea mays3E-6018554680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF247(2) DUF778(1) LRAT(1) Peptidase_C97(1)
TargetP: Mitochondria (Class 3 C0.009; M0.843; S0.053; _0.374)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 680 aa (-cTP 673)
Molecular Weight 77.68 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1584Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help