PPDB

The Plant Proteome Database

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AT4G31830.1   transmembrane protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os09g04100.1 7Oryza sativa3E-289455670 (0)_
Zm00001eb095580_P001 agpv5Zea mays1E-239455640 (0)_
GRMZM2G065227_P01 3.21Zea mays1E-239455640 (0)_
v1_GRMZM2G065227_P01 4a53Zea mays1E-239455640 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATP19(1) DUF3881(1)
TargetP: Cytoplasm (Class 4 C0.577; M0.099; S0.008; _0.793)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 100 aa (-cTP 73)
Molecular Weight 10.60 kDA(-cTP )
PI 9.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2271Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)
21311031(mitochondria)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help