PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G31820.1   Phototropic-responsive NPH3 family protein

Lab Annot. Phototropic-responsive NPH3 protein
Mapman: 30.11 signalling.light
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G31820.2 11Arabidopsis thaliana05181001000 (0)_
AT5G67440.1 11Arabidopsis thaliana3E-15657644610 (0)_
AT5G67440.3 11Arabidopsis thaliana3E-15657644610 (0)_
Os09g25330.1 7Oryza sativa062349670 (0)_
Os06g08550.1 7Oryza sativa049353720 (0)_
Os12g39380.1 7Oryza sativa4E-18049952710 (0)_
Zm00001eb099640_P001 agpv5Zea mays060550670 (0)_
Zm00001eb374600_P001 agpv5Zea mays050854710 (0)_
GRMZM2G067053_P01 3.21Zea mays050854710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BTB(1) DUF3437(2) NPH3(1)
TargetP: Cytoplasm (Class 2 C0.082; M0.082; S0.193; _0.906)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 571 aa (-cTP 511)
Molecular Weight 64.40 kDA(-cTP )
PI 6.92(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17644812(plasma membrane - suspension cells)
20706207(contaminants cell cycle interactome (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help