PPDB

The Plant Proteome Database

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AT4G31580.1   serine/arginine-rich 22

Lab Annot. serine/arginine-rich 22
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
TAIR curated location: nucleolus & nuclear speck15133128,15686520
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G31580.2 11Arabidopsis thaliana1E-1352001001004 (4)_
AT2G24590.1 11Arabidopsis thaliana1E-6820278838 (8)_
AT1G23860.2 11Arabidopsis thaliana1E-4617662661 (1)_
Os02g39720.2 7Oryza sativa2E-5921859637 (7)_
Os02g54770.2 7Oryza sativa5E-58206596613 (13)_
Os02g54770.1 7Oryza sativa5E-58206596613 (13)_
GRMZM2G151923_P04 3.21Zea mays2E-5720664681 (1)_
GRMZM2G151923_P02 3.21Zea mays2E-5720664681 (1)_
v1_GRMZM2G151923_P01 4a53Zea mays2E-5720664686 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) RRM_7(1) zf-CCHC(1) zf-CCHC_3(1)
TargetP: Cytoplasm (Class 4 C0.074; M0.363; S0.032; _0.754)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 200 aa (-cTP 177)
Molecular Weight 22.46 kDA(-cTP )
PI 11.44(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

16807317(Phosphoproteins)
18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help