PPDB

PPDB	The Plant Proteome Database

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AT4G31450.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G31450.2 11 Arabidopsis thaliana 0 497 100 100 0 (0) _
AT5G24870.1 11 Arabidopsis thaliana 8E-77 549 37 52 0 (0) _
AT5G24870.3 11 Arabidopsis thaliana 8E-77 549 37 52 0 (0) _
Os06g48040.1 7 Oryza sativa 1E-66 172 59 75 0 (0) _
Os02g05692.1 7 Oryza sativa 1E-61 171 59 74 0 (0) M
Os04g51400.3 7 Oryza sativa 4E-37 115 55 73 0 (0) _
Zm00001eb226390_P002 agpv5 Zea mays 3E-59 210 51 65 0 (0) C
GRMZM2G096211_P01 3.21 Zea mays 3E-59 210 51 65 0 (0) C
Zm00001eb232400_P003 agpv5 Zea mays 4E-57 177 53 67 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_2(1) FANCL_C(1) PHD(1) Prok-RING_1(1) zf-ANAPC11(1) zf-C3H2C3(1) zf-C3HC4(1)
TargetP:	Cytoplasm (Class 3 C0.127; M0.215; S0.004; _0.714)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	497 aa (-cTP 407)
Molecular Weight	55.00 kDA(-cTP )
PI	8.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data