PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G31370.1   FASCICLIN-like arabinogalactan protein 5 precursor

Lab Annot.
Mapman: 10.5.1 cell wall.cell wall proteins.AGPs
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G24450.1 11Arabidopsis thaliana1E-9228455710 (0)S
AT3G12660.1 11Arabidopsis thaliana3E-3114641640 (0)S
AT2G45470.1 11Arabidopsis thaliana4E-271773758680 (502)S
Os02g26320.1 7Oryza sativa8E-3926737520 (0)S
Os04g48490.1 7Oryza sativa4E-2315236554 (4)S
Os02g49420.1 7Oryza sativa2E-1917328500 (0)S
Zm00001eb236720_P001 agpv5Zea mays4E-3720238550 (0)S
v1_GRMZM2G109291_P01 4a53Zea mays4E-37202385512 (8)S
GRMZM2G109291_P01 3.21Zea mays4E-37202385512 (12)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Fasciclin(1)
TargetP: Secreted (Class 1 C0.003; M0.033; S0.978; _0.027)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 278 aa (-cTP 261)
Molecular Weight 29.92 kDA(-cTP )
PI 5.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help