PPDB

 The Plant Proteome Database

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AT4G31200.1   SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
Lab Annot. SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G31200.2 11Arabidopsis thaliana065010010030 (21)M
AT4G31200.3 11Arabidopsis thaliana065010010030 (21)M
Os06g46880.1 7Oryza sativa054258690 (0)_
GRMZM2G082322_P01 3.21Zea mays3E-17954655672 (2)_
Zm00001eb273620_P002 agpv5Zea mays3E-17954655670 (0)_
v1_GRMZM2G082322_P01 4a53Zea mays3E-17954655677 (7)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CID(1) Surp(2)
TargetP: Mitochondria (Class 5 C0.035; M0.708; S0.023; _0.569)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 650 aa (-cTP 591)
Molecular Weight 72.50 kDA(-cTP )
PI 6.23(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2287Detail        [A. thaliana] Clp C1 WT
2288Detail        [A. thaliana] Clp C1 WT
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2304Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help