PPDB

The Plant Proteome Database

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AT4G31140.1   O-Glycosyl hydrolases family 17 protein

Lab Annot. glycosyl hydrolase family 17 protein
Mapman: 35.1 not assigned.no ontology
Curated Location plasma membrane

TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G58090.1 11Arabidopsis thaliana0429658024 (21)M
AT5G20870.1 11Arabidopsis thaliana8E-17947154680 (0)S
AT3G04010.1 11Arabidopsis thaliana1E-16745054682 (2)S
Os02g04670.1 7Oryza sativa043662780 (0)S
Os08g12800.1 7Oryza sativa046859752 (2)S
Os03g27980.1 7Oryza sativa043358750 (0)S
Zm00001eb232030_P002 agpv5Zea mays043159740 (0)S
Zm00001eb232030_P001 agpv5Zea mays043163790 (0)S
v1_GRMZM2G097207_P01 4a53Zea mays043163790 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_17(1) X8(1)
TargetP: Secreted (Class 1 C0.006; M0.012; S0.919; _0.070)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 484 aa (-cTP 391)
Molecular Weight 52.71 kDA(-cTP )
PI 5.80(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi

* For details about the exprimental sources click here.

Published Proteomics Data

15215502(Vacuolar proteome)
12805588(GBI-anchored-callus)
14517339(GPI anchored suspension cells)
16602701(GPI-anchored Plasma membrane suspension cells)
16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
17526915(glycoproteome cell wall (stems))
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help