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AT4G31120.1 SHK1 binding protein 1

Lab Annot.

ATPRMT5/PRMT5/SKB1 (SHK1 BINDING PROTEIN 1); protein methyltransferase
Mapman: 25 C1-metabolism

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G31120.2 11 Arabidopsis thaliana 0 584 100 100 49 (12) _
Os02g04660.1 7 Oryza sativa 0 660 71 82 5 (5) _
Os02g04660.2 7 Oryza sativa 0 439 75 86 5 (5) M
GRMZM2G011456_P03 3.21 Zea mays 0 662 69 80 14 (14) _
Zm00001eb209210_P001 agpv5 Zea mays 0 663 68 79 0 (0) _
v1_GRMZM2G169927_P02 4a53 Zea mays 0 663 68 79 5 (5) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Met_10(1) Methyltransf_25(1) PRMT5(1) PRMT5_C(1) PRMT5_TIM(1)
TargetP:	Cytoplasm (Class 2 C0.057; M0.253; S0.040; _0.861)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	642 aa (-cTP 598)
Molecular Weight	71.87 kDA(-cTP )
PI	5.31(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2289	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2302	Detail								[A. thaliana]		Clp C1 WT
2303	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data