PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G31115.1   DUF1997 family protein%2C putative (DUF1997)

Lab Annot. Protein of unknown function (DUF1997)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G31115.2 11Arabidopsis thaliana027491911 (1)_
AT5G04440.1 11Arabidopsis thaliana1E-23188325384 (75)C
AT5G04440.2 11Arabidopsis thaliana2E-1918331530 (0)C
Os08g41040.1 7Oryza sativa6E-6016454750 (0)M
Os03g05320.2 7Oryza sativa1E-2616036601 (1)C
Os03g05320.3 7Oryza sativa1E-2515437591 (1)_
Zm00001eb035450_P002 agpv5Zea mays1E-5817251710 (0)M
GRMZM2G016088_P01 3.21Zea mays6E-58172517114 (2)_
v1_GRMZM2G016088_P01 4a53Zea mays6E-5817251715 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1997(1)
TargetP: Chloroplast (Class 5 C0.473; M0.466; S0.007; _0.255)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 250 aa (-cTP 202)
Molecular Weight 28.34 kDA(-cTP 22.93)
PI 6.24(-cTP 5.07)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help