PPDB

The Plant Proteome Database

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AT4G30890.1   ubiquitin-specific protease 24

Lab Annot. ubiquitin-specific protease 24 (UBP24)
Mapman: 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G30890.3 11Arabidopsis thaliana05511001001 (1)_
AT4G30890.2 11Arabidopsis thaliana05511001001 (1)_
AT1G17110.2 11Arabidopsis thaliana1E-2439026420 (0)S
Os07g46660.2 7Oryza sativa1E-15757748609 (9)_
Os07g46660.1 7Oryza sativa2E-15558047609 (9)_
Os02g14730.1 7Oryza sativa2E-2841228420 (0)S
Zm00001eb329890_P001 agpv5Zea mays1E-16356949610 (0)_
v1_GRMZM2G327635_P01 4a53Zea mays3E-15357748600 (0)_
GRMZM2G327635_P01 3.21Zea mays3E-15357748600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_C98(2) UCH(1) UCH_1(1)
TargetP: Cytoplasm (Class 2 C0.119; M0.057; S0.042; _0.880)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 551 aa (-cTP 482)
Molecular Weight 60.44 kDA(-cTP )
PI 7.70(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1494Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help