PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G30850.1   heptahelical transmembrane protein2

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G30850.2 11Arabidopsis thaliana03581001000 (0)_
AT2G24150.1 11Arabidopsis thaliana036169790 (0)_
AT2G24150.2 11Arabidopsis thaliana3E-12927270780 (0)S
Os06g44250.1 7Oryza sativa9E-10734046620 (0)C
Os06g43620.1 7Oryza sativa3E-8130944590 (0)_
Os03g13040.1 7Oryza sativa2E-7936639510 (0)_
Zm00001eb206660_P001 agpv5Zea mays2E-10233546620 (0)M
Zm00001eb388960_P001 agpv5Zea mays3E-9933347660 (0)_
GRMZM2G030099_P01 3.21Zea mays3E-9933347660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HlyIII(1)
TargetP: Cytoplasm (Class 2 C0.036; M0.204; S0.056; _0.876)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 7 TMs
TAT position:
Length 358 aa (-cTP 328)
Molecular Weight 41.02 kDA(-cTP )
PI 9.23(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help