PPDB

The Plant Proteome Database

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AT4G30840.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot. Nucleoporin Nup43
Mapman: 29.3.1 protein.targeting.nucleus
Curated Location nucleus (Pubmed: 21189294 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os08g16600.1 7Oryza sativa4E-9736449630 (0)C
Zm00001eb177980_P001 agpv5Zea mays2E-10036649610 (0)C
v1_GRMZM2G063188_P02 4a53Zea mays2E-100366496116 (16)C
GRMZM2G063188_P02 3.21Zea mays2E-10036649614 (4)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 3 C0.070; M0.253; S0.015; _0.768)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 361 aa (-cTP 302)
Molecular Weight 39.35 kDA(-cTP )
PI 4.80(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help