PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G30825.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid nucleoid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G06920.1 11 Arabidopsis thaliana 3E-50 765 21 43 0 (0) _
AT3G06920.3 11 Arabidopsis thaliana 4E-50 765 21 43 0 (0) _
AT3G06920.2 11 Arabidopsis thaliana 4E-50 765 21 43 0 (0) _
Os09g25550.1 7 Oryza sativa 0 813 52 70 0 (0) M
Os07g40120.1 7 Oryza sativa 1E-53 594 24 46 0 (0) C
Os05g19380.1 7 Oryza sativa 9E-46 587 23 44 16 (16) C
Zm00001eb414570_P003 agpv5 Zea mays 0 831 50 69 0 (0) M
Zm00001eb414570_P002 agpv5 Zea mays 0 832 43 61 0 (0) M
Zm00001eb414570_P001 agpv5 Zea mays 0 832 43 61 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CNOT1_TTP_bind(3) ECSIT(5) Exog_C(1) MRP-S27(5) PPR(19) PPR_1(16) PPR_2(19) PPR_
TargetP:	Chloroplast (Class 4 C0.557; M0.265; S0.001; _0.192)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	904 aa (-cTP 843)
Molecular Weight	103.31 kDA(-cTP 96.41)
PI	8.28(-cTP 7.53)

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data