PPDB

PPDB	The Plant Proteome Database

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AT4G30640.1 RNI-like superfamily protein

Lab Annot.

RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G57900.1 11 Arabidopsis thaliana 3E-101 279 53 71 0 (0) _
AT4G05497.1 11 Arabidopsis thaliana 3E-21 250 29 46 0 (0) C
AT4G05460.1 11 Arabidopsis thaliana 3E-20 252 28 47 0 (0) C
Os08g16840.1 7 Oryza sativa 1E-73 298 41 59 0 (0) _
Os02g21240.1 7 Oryza sativa 7E-17 265 26 44 0 (0) _
Os04g37590.1 7 Oryza sativa 1E-15 268 26 44 0 (0) M
Zm00001eb177870_P001 agpv5 Zea mays 1E-74 283 43 61 0 (0) _
Zm00001eb177870_P002 agpv5 Zea mays 1E-36 156 43 62 0 (0) _
GRMZM2G059643_P01 3.21 Zea mays 2E-20 128 39 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1699(2) F-box(1) F-box-like(1) LRR_1(4) LRR_4(3) LRR_6(4) LRR_8(4)
TargetP:	Cytoplasm (Class 1 C0.075; M0.115; S0.045; _0.915)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	301 aa (-cTP 297)
Molecular Weight	34.30 kDA(-cTP )
PI	5.82(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data