PPDB

The Plant Proteome Database

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AT4G30510.1   yeast autophagy 18 B-like protein

Lab Annot. ATG18b - (ATG9/2/18 complex)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G30510.2 11Arabidopsis thaliana03121001000 (0)C
AT3G62770.1 11Arabidopsis thaliana2E-4035128492 (0)C
AT3G62770.3 11Arabidopsis thaliana5E-4028131522 (0)C
Os02g54910.1 7Oryza sativa1E-13435153730 (0)_
Os01g07400.2 7Oryza sativa3E-3625033530 (0)C
Os01g07400.1 7Oryza sativa3E-3625033530 (0)C
Zm00001eb257610_P003 agpv5Zea mays1E-15336258750 (0)_
GRMZM2G018573_P01 3.21Zea mays1E-15336258750 (0)_
v1_GRMZM2G018573_P01 4a53Zea mays1E-15336258750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: WD40(4)
TargetP: Cytoplasm (Class 3 C0.120; M0.122; S0.083; _0.707)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 366 aa (-cTP 354) (-lTP 179)
Molecular Weight 39.88 kDA(-cTP )(-lTP 19.51)
PI 8.26(-cTP )(-lTP 8.585)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help