PPDB

PPDB	The Plant Proteome Database

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AT4G30440.1 UDP-D-glucuronate 4-epimerase 1

Lab Annot.

UDP-D-glucuronate 4-epimerase 1
Mapman: 10.1.6 cell wall.precursor synthesis.GAE

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G02000.1 11 Arabidopsis thaliana 0 425 71 82 0 (0) _
AT4G00110.1 11 Arabidopsis thaliana 0 433 69 80 0 (0) _
AT2G45310.1 11 Arabidopsis thaliana 0 437 67 79 0 (0) _
Os02g54890.1 7 Oryza sativa 0 435 81 90 0 (0) _
Os06g08810.1 7 Oryza sativa 0 431 74 86 0 (0) _
Os03g14540.1 7 Oryza sativa 0 362 69 83 0 (0) _
v1_GRMZM2G110558_P01 4a53 Zea mays 0 435 80 89 1 (1) _
GRMZM2G110558_P01 3.21 Zea mays 0 435 80 89 0 (0) _
Zm00001eb257590_P001 agpv5 Zea mays 0 435 80 89 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	3Beta_HSD(1) adh_short(1) Epimerase(1) GDP_Man_Dehyd(1) KR(1) NAD_binding_10(1)
TargetP:	Cytoplasm (Class 1 C0.099; M0.061; S0.032; _0.957)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	429 aa (-cTP 402)
Molecular Weight	47.46 kDA(-cTP )
PI	9.62(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
22430844(Golgi-cell-culture)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data