PPDB

PPDB	The Plant Proteome Database

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AT4G30430.1 tetraspanin9

Lab Annot.

Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G23810.1 11 Arabidopsis thaliana 2E-132 271 66 81 15 (15) S
AT4G28050.1 11 Arabidopsis thaliana 1E-124 260 62 78 0 (0) S
AT3G45600.1 11 Arabidopsis thaliana 4E-80 263 43 63 5 (5) S
Os09g25760.1 7 Oryza sativa 7E-108 267 53 72 0 (0) S
Os08g34460.1 7 Oryza sativa 3E-98 268 49 68 1 (1) S
Os08g16050.1 7 Oryza sativa 3E-75 232 45 66 0 (0) S
Zm00001eb313460_P001 agpv5 Zea mays 2E-110 271 53 71 0 (0) S
GRMZM2G041175_P01 3.21 Zea mays 2E-110 271 53 71 2 (2) S
v1_GRMZM2G041175_P01 4a53 Zea mays 2E-110 271 53 71 5 (5) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cadherin_C_2(2) DUF1418(2) DUF2207(2) DUF2700(2) DUF4870(2) FA_desaturase(1) Fix
TargetP:	Secreted (Class 1 C0.001; M0.051; S0.978; _0.030)
Predotar:
Subcel. Location:
TM-HMM prediction:	4 TMs
Aramemnon:	3 TMs
TAT position:
Length	272 aa (-cTP 241)
Molecular Weight	31.06 kDA(-cTP )
PI	8.84(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data