PPDB

The Plant Proteome Database

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AT4G30280.1   xyloglucan endotransglucosylase/hydrolase 18

Lab Annot.
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G65310.2 11Arabidopsis thaliana028293970 (0)_
AT1G65310.1 11Arabidopsis thaliana0282939710 (10)S
AT4G30290.1 11Arabidopsis thaliana027592955 (5)S
Os06g48160.1 7Oryza sativa2E-11927457723 (3)S
Os06g48200.1 7Oryza sativa1E-11527856720 (0)S
Os06g48180.1 7Oryza sativa8E-11525959750 (0)S
v1_GRMZM2G026980_P01 4a53Zea mays2E-11825659765 (5)C
GRMZM2G026980_P01 3.21Zea mays2E-11825659762 (2)C
Zm00001eb226470_P001 agpv5Zea mays9E-11825659760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_16(1) XET_C(1)
TargetP: Secreted (Class 1 C0.004; M0.038; S0.990; _0.022)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 282 aa (-cTP 199)
Molecular Weight 32.07 kDA(-cTP )
PI 8.79(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help