PPDB

PPDB	The Plant Proteome Database

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AT4G30260.1 Integral membrane Yip1 family protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G30260.2 11 Arabidopsis thaliana 0 280 100 100 0 (0) M
AT4G30260.3 11 Arabidopsis thaliana 0 280 100 100 0 (0) _
AT2G18840.1 11 Arabidopsis thaliana 1E-152 284 88 91 0 (0) _
Os01g64760.1 7 Oryza sativa 8E-121 285 75 83 0 (0) _
Os05g36150.1 7 Oryza sativa 4E-109 188 90 95 0 (0) C
GRMZM2G046025_P01 3.21 Zea mays 8E-136 294 75 81 0 (0) C
Zm00001eb366670_P001 agpv5 Zea mays 8E-136 294 75 81 0 (0) C
v1_GRMZM2G046025_P01 4a53 Zea mays 8E-136 294 75 81 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1624(1) Yip1(1)
TargetP:	Cytoplasm (Class 3 C0.357; M0.024; S0.002; _0.828)
Predotar:
Subcel. Location:
TM-HMM prediction:	5 TMs
Aramemnon:	5 TMs
TAT position:
Length	280 aa (-cTP 195)
Molecular Weight	30.22 kDA(-cTP )
PI	7.74(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15060130(Plasma Membrane proteome)
16618929(UNKNOWN-LOPIT-callus)
19546170(mature pollen grains)
21826108(SYP trans-Golgi-filtered)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data