PPDB

The Plant Proteome Database

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AT4G29960.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g51780.1 7Oryza sativa1E-51290425511 (11)_
Zm00001eb071460_P001 agpv5Zea mays3E-4825944560 (0)_
GRMZM2G057698_P02 3.21Zea mays3E-4425743560 (0)_
Zm00001eb430500_P001 agpv5Zea mays3E-4425743560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 1 C0.118; M0.099; S0.072; _0.929)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 3 TMs
TAT position:
Length 291 aa (-cTP 233)
Molecular Weight 31.90 kDA(-cTP )
PI 5.41(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help