PPDB

The Plant Proteome Database

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AT4G29920.1   Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein

Lab Annot. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases protein
Mapman: 20.2.1 stress.abiotic.heat
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G29920.2 11Arabidopsis thaliana0102099990 (0)C
AT5G57130.1 11Arabidopsis thaliana0109044580 (0)_
AT3G52490.1 11Arabidopsis thaliana1E-11180435510 (0)_
Os04g23220.1 7Oryza sativa6E-134114031450 (0)M
Os02g26600.1 7Oryza sativa2E-8963436500 (0)M
Os04g33980.1 7Oryza sativa2E-7491930440 (0)M
Zm00001eb420410_P003 agpv5Zea mays1E-116112531450 (0)M
GRMZM2G032547_P01 3.21Zea mays1E-115112531450 (0)M
Zm00001eb420410_P002 agpv5Zea mays1E-115112531450 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Clp_N(2)
TargetP: Chloroplast (Class 4 C0.493; M0.239; S0.001; _0.179)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1017 aa (-cTP 1002) (-lTP 909)
Molecular Weight 113.78 kDA(-cTP 112.10)(-lTP 101.89)
PI 5.81(-cTP 5.79)(-lTP 5.323)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
19995723(chloroplast reference proteome)
21472856(mitochondria-LC-MS/MS-uncurated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help