PPDB

 The Plant Proteome Database

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AT4G29860.1   Transducin/WD40 repeat-like superfamily protein
Lab Annot. Transducin/WD40 repeat-like protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G11160.3 11Arabidopsis thaliana7E-089135490 (0)S
AT1G11160.2 11Arabidopsis thaliana7E-089135490 (0)_
AT1G11160.1 11Arabidopsis thaliana7E-089135490 (0)_
Os06g04040.1 7Oryza sativa4E-13837353690 (0)_
Os06g04040.2 7Oryza sativa3E-8728448650 (0)_
Os06g04040.3 7Oryza sativa3E-5120645600 (0)_
v1_GRMZM2G396562_P01 4a53Zea mays3E-14438054700 (0)M
GRMZM2G396562_P01 3.21Zea mays3E-14438054700 (0)M
Zm00001eb378230_P001 agpv5Zea mays3E-14438054700 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ANAPC4_WD40(6) eIF2A(3) Ge1_WD40(3) Nup160(4) PQQ_3(3) WD40(6)
TargetP: Chloroplast (Class 5 C0.500; M0.188; S0.015; _0.354)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 386 aa (-cTP 376)
Molecular Weight 41.99 kDA(-cTP 40.88)
PI 5.61(-cTP 5.52)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18463617(suspension cells-phosphorylated proteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help