PPDB

PPDB	The Plant Proteome Database

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AT4G29830.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

VIP3 (VERNALIZATION INDEPENDENCE 3); nucleotide binding
Mapman: 30.5 signalling.G-proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G49660.1 11 Arabidopsis thaliana 2E-27 244 30 50 0 (0) C
AT2G41500.2 11 Arabidopsis thaliana 4E-27 238 32 49 0 (0) C
AT2G41500.1 11 Arabidopsis thaliana 4E-27 238 32 49 1 (0) C
Os11g43890.1 7 Oryza sativa 2E-153 324 69 85 1 (1) _
Os03g23909.1 6 Oryza sativa 1E-28 250 33 48 0 (0) _
Os03g23935.1 7 Oryza sativa 1E-28 250 33 48 0 (0) _
Zm00001eb165440_P001 agpv5 Zea mays 1E-152 323 69 83 0 (0) _
v1_GRMZM2G126552_P01 4a53 Zea mays 1E-152 323 69 83 15 (15) _
GRMZM2G126552_P01 3.21 Zea mays 1E-152 323 69 83 5 (5) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(5) Cytochrom_D1(2) eIF2A(2) Frtz(3) Ge1_WD40(5) Nbas_N(3) PQQ_3(4) T
TargetP:	Cytoplasm (Class 3 C0.140; M0.096; S0.089; _0.728)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	321 aa (-cTP 297)
Molecular Weight	34.26 kDA(-cTP )
PI	5.84(-cTP )

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Leaf)
17407188(cotyledon)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data