PPDB

PPDB	The Plant Proteome Database

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AT4G29780.1 nuclease

Lab Annot.

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits to 944 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other Eukaryotes - 18 (
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G12010.1 11 Arabidopsis thaliana 0 477 57 73 48 (48) _
AT3G55350.1 11 Arabidopsis thaliana 3E-36 359 29 47 0 (0) _
AT3G63270.1 11 Arabidopsis thaliana 4E-34 314 29 50 0 (0) _
Os01g40070.1 7 Oryza sativa 0 464 55 71 0 (0) _
Os05g51520.1 7 Oryza sativa 1E-159 352 61 76 0 (0) _
Os01g09220.1 7 Oryza sativa 5E-153 346 60 76 0 (0) _
GRMZM2G037015_P01 3.21 Zea mays 1E-179 467 55 70 0 (0) _
v1_GRMZM2G037015_P01 4a53 Zea mays 1E-179 467 55 70 3 (3) _
GRMZM2G129291_P01 3.21 Zea mays 7E-170 363 62 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DDE_Tnp_4(1) Plant_tran(1)
TargetP:	Cytoplasm (Class 2 C0.151; M0.117; S0.159; _0.775)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	540 aa (-cTP 468)
Molecular Weight	60.12 kDA(-cTP )
PI	6.95(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data