PPDB

The Plant Proteome Database

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AT4G29520.1   nucleophosmin

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os06g05740.1 7Oryza sativa2E-9826363794 (4)S
GRMZM2G103179_P01 3.21Zea mays3E-11326862790 (0)S
v1_GRMZM2G103179_P01 4a53Zea mays3E-11326862790 (0)S
Zm00001eb376850_P001 agpv5Zea mays3E-11326862790 (0)S

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cwf_Cwc_15(1) DNA_pol_phi(2) DUF836(2) Fz(2) SapB_1(2)
TargetP: Secreted (Class 2 C0.030; M0.132; S0.809; _0.027)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 306 aa (-cTP 281)
Molecular Weight 34.36 kDA(-cTP )
PI 7.96(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1494Detail       leaf [A. thaliana]  
1544Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1557Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
2247Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
20118269(developing seeds)
19334764(plasma membrane (cell culture))
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help