PPDB

The Plant Proteome Database

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AT4G29490.1   Metallopeptidase M24 family protein

Lab Annot. M24 peptidase (ICP55 homologue)
Mapman: 29.5.7.6.1* protein.degradation.metalloprotease.MG.M24
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G09300.1 11Arabidopsis thaliana2E-43473254510 (3)M
AT1G09300.2 11Arabidopsis thaliana3E-4347325454 (3)_
Os02g13140.1 7Oryza sativa047575870 (0)C
Os12g37640.4 7Oryza sativa2E-3142324450 (0)_
Os12g37640.1 7Oryza sativa3E-3142324450 (0)M
Zm00001eb239790_P002 agpv5Zea mays048275860 (0)C
GRMZM2G021110_P01 3.21Zea mays048275860 (0)C
Zm00001eb239790_P001 agpv5Zea mays048275850 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Abhydro_lipase(2) AMP_N(1) Peptidase_M24(2)
TargetP: Chloroplast (Class 3 C0.812; M0.046; S0.081; _0.345)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 486 aa (-cTP 472)
Molecular Weight 54.40 kDA(-cTP 52.88)
PI 5.80(-cTP 5.83)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2044Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2045Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2046Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2047Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2048Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2049Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2050Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help