PPDB

The Plant Proteome Database

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AT4G29270.1   HAD superfamily%2C subfamily IIIB acid phosphatase

Lab Annot.
Mapman: 26.13 misc.acid and other phosphatases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G29260.1 11Arabidopsis thaliana9E-122255677951 (34)S
AT4G25150.1 11Arabidopsis thaliana3E-8521354730 (0)S
AT5G51260.1 11Arabidopsis thaliana1E-8125145670 (0)S
Os06g04790.1 7Oryza sativa2E-8421253720 (0)M
Os06g36400.1 7Oryza sativa6E-6921648667 (7)S
Os03g21480.1 7Oryza sativa9E-5921442600 (0)S
AC196779.3_FGP003 3.21Zea mays8E-7821351711 (1)S
Zm00001eb270230_P003 agpv5Zea mays8E-7821351710 (0)S
v1_AC196779.3_FGP003 4a53Zea mays8E-7821351711 (1)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Acid_phosphat_B(1) DUF2608(2)
TargetP: Secreted (Class 1 C0.063; M0.033; S0.983; _0.004)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 256 aa (-cTP 219)
Molecular Weight 28.75 kDA(-cTP )
PI 8.61(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1113Detail        [A. thaliana] control for RARE-1 co-IP wild-type
1750Detail        [A. thaliana] Col-0
1751Detail        [A. thaliana] Col-0
1752Detail        [A. thaliana] ORMM1
2245Detail       seedlings [A. thaliana] total tissue wild-type
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
18796151(cell wall (hypocotyl))
20516081(tagged-26S proteasome-affinity)
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


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