PPDB

PPDB	The Plant Proteome Database

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AT4G29160.1 SNF7 family protein

Lab Annot.

SNF7.1
Mapman: 27.3.71 RNA.regulation of transcription.SNF7

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G29160.3 11 Arabidopsis thaliana 5E-157 219 100 100 3 (0) _
AT4G29160.2 11 Arabidopsis thaliana 4E-136 192 100 100 3 (0) _
AT2G19830.2 11 Arabidopsis thaliana 2E-108 220 82 85 0 (0) _
Os06g40620.1 7 Oryza sativa 6E-93 221 67 78 0 (0) _
Os06g40620.2 7 Oryza sativa 6E-93 221 67 78 0 (0) _
Os09g09480.1 7 Oryza sativa 2E-92 221 79 88 2 (2) _
Zm00001eb162120_P005 agpv5 Zea mays 3E-101 221 79 89 0 (0) _
Zm00001eb162120_P003 agpv5 Zea mays 3E-101 221 79 89 0 (0) _
Zm00001eb162120_P006 agpv5 Zea mays 3E-101 221 79 89 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cob_adeno_trans(2) DUF948(2) EMP24_GP25L(1) Glyco_hydro_63N(1) Sec20(3) Snf7(1)
TargetP:	Cytoplasm (Class 2 C0.061; M0.181; S0.095; _0.857)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	219 aa (-cTP 193)
Molecular Weight	24.33 kDA(-cTP )
PI	4.90(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22010978(Endosomal-sorting-interactome-VPS2.2)
21173025(root proteome)

Comparative Proteomics Data