PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G29090.1   Ribonuclease H-like superfamily protein

Lab Annot.
Mapman: 28.99 DNA.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G34320.1 11Arabidopsis thaliana7E-13629162780 (0)M
AT3G09510.1 11Arabidopsis thaliana4E-5848126450 (0)_
AT5G38920.1 11Arabidopsis thaliana1E-4523339520 (0)_
Os12g29700.1 7Oryza sativa2E-6556329470 (0)S
Os01g27640.1 7Oryza sativa8E-6251329470 (0)_
Os12g01900.1 7Oryza sativa1E-6056726450 (0)_
Zm00001eb204330_P001 agpv5Zea mays2E-1038821400 (0)_
Zm00001eb190670_P001 agpv5Zea mays8E-0929124410 (0)_
v1_GRMZM2G417222_P01 4a53Zea mays1E-0813827470 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RVT_3(3) zf-RVT(2)
TargetP: Secreted (Class 4 C0.005; M0.070; S0.731; _0.509)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 575 aa (-cTP 558)
Molecular Weight 66.71 kDA(-cTP )
PI 9.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help