PPDB

PPDB	The Plant Proteome Database

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AT4G28980.1 CDK-activating kinase 1AT

Lab Annot.

CDK-activating kinase 1AT
Mapman: 31.3 cell.cycle; 30.1.1 signalling.in sugar and nutrient physiology

Curated Location

TAIR curated location: nucleus & cytoplasm15610358

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G28980.2 11 Arabidopsis thaliana 0 479 100 100 1 (1) _
AT4G28980.3 11 Arabidopsis thaliana 0 479 100 100 0 (0) _
AT1G18040.1 11 Arabidopsis thaliana 3E-27 145 37 51 0 (0) _
Os06g22820.1 7 Oryza sativa 5E-153 480 50 66 0 (0) _
Os05g32600.1 7 Oryza sativa 6E-28 146 39 52 0 (0) _
Os03g01850.2 7 Oryza sativa 1E-26 132 40 61 2 (2) _
GRMZM2G009703_P01 3.21 Zea mays 1E-155 481 50 66 4 (0) _
Zm00001eb278130_P001 agpv5 Zea mays 1E-155 481 50 66 0 (0) _
v1_GRMZM2G009703_P01 4a53 Zea mays 1E-155 481 50 66 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	APH(2) PK_Tyr_Ser-Thr(2) Pkinase(2) RIO1(1)
TargetP:	Cytoplasm (Class 3 C0.064; M0.227; S0.042; _0.824)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	479 aa (-cTP 465)
Molecular Weight	53.75 kDA(-cTP )
PI	4.45(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2255	Detail								leaf [A. thaliana]	total seedlings	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data