PPDB

PPDB	The Plant Proteome Database

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AT4G28890.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G20030.1 11 Arabidopsis thaliana 6E-152 427 60 69 0 (0) S
AT5G05810.1 11 Arabidopsis thaliana 1E-34 299 36 51 0 (0) S
AT4G40070.1 11 Arabidopsis thaliana 1E-28 175 38 53 0 (0) M
Os05g51780.1 7 Oryza sativa 7E-50 266 37 54 0 (0) S
Os06g48065.1 7 Oryza sativa 4E-44 343 32 45 0 (0) _
Os09g29310.1 7 Oryza sativa 4E-22 148 39 51 0 (0) S
Zm00001eb345580_P001 agpv5 Zea mays 8E-47 416 30 49 0 (0) S
v1_GRMZM2G417208_P01 4a53 Zea mays 3E-45 386 31 50 0 (0) S
GRMZM2G417208_P01 3.21 Zea mays 3E-45 386 31 50 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Prok-RING_4(1) RINGv(1) Tmpp129(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4
TargetP:	Secreted (Class 5 C0.013; M0.075; S0.488; _0.317)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	432 aa (-cTP 415)
Molecular Weight	49.37 kDA(-cTP )
PI	7.65(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data