PPDB

The Plant Proteome Database

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AT4G28820.1   HIT-type Zinc finger family protein

Lab Annot.
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G28820.3 11Arabidopsis thaliana7E-1221731001000 (0)_
AT4G28820.2 11Arabidopsis thaliana2E-11917399990 (0)_
AT4G28820.4 11Arabidopsis thaliana3E-11917399990 (0)_
Os01g61430.1 7Oryza sativa1E-2416933530 (0)_
v1_GRMZM2G105307_P01 4a53Zea mays7E-2316035540 (0)_
GRMZM2G105307_P01 3.21Zea mays7E-2316035540 (0)_
Zm00001eb149030_P003 agpv5Zea mays7E-2316035540 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Gp45_2(2) zf-C2H2_4(2) zf-HIT(1) zf-MYND(1)
TargetP: Cytoplasm (Class 4 C0.076; M0.097; S0.259; _0.559)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 173 aa (-cTP 161)
Molecular Weight 19.15 kDA(-cTP )
PI 4.97(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help