PPDB

 The Plant Proteome Database

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AT4G28790.2   basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G28790.1 11Arabidopsis thaliana03311001000 (0)_
AT4G28790.6 11Arabidopsis thaliana02871001000 (0)_
AT4G28790.4 11Arabidopsis thaliana02871001000 (0)_
Os03g56950.5 7Oryza sativa1E-219153730 (0)_
Os03g56950.6 7Oryza sativa1E-219153730 (0)_
Os03g56950.3 7Oryza sativa3E-219153730 (0)_
Zm00001eb031560_P001 agpv5Zea mays6E-238458760 (0)C
v1_GRMZM2G087622_P01 4a53Zea mays2E-228458760 (0)S
Zm00001eb031560_P002 agpv5Zea mays3E-228458760 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cut8(1) HLH(1)
TargetP: Cytoplasm (Class 3 C0.072; M0.082; S0.186; _0.770)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 340 aa (-cTP 285)
Molecular Weight 37.64 kDA(-cTP )
PI 7.76(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help