PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G28690.1   hypothetical protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G28690.2 11Arabidopsis thaliana044893930 (0)_
AT2G20310.1 11Arabidopsis thaliana4E-5027044580 (0)_
AT4G27660.1 11Arabidopsis thaliana4E-2413240560 (0)_
Os10g32850.1 7Oryza sativa6E-2712046560 (0)_
Os03g04740.1 7Oryza sativa7E-2514939510 (0)_
Os10g42270.1 7Oryza sativa6E-2210547590 (0)C
GRMZM2G004057_P02 3.21Zea mays9E-3012046600 (0)_
v1_GRMZM2G004057_P02 4a53Zea mays9E-3012046600 (0)_
Zm00001eb046350_P002 agpv5Zea mays1E-2819135510 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 2 C0.091; M0.057; S0.167; _0.931)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 448 aa (-cTP 436)
Molecular Weight 49.23 kDA(-cTP )
PI 6.42(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help