PPDB

The Plant Proteome Database

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AT4G28520.4   cruciferin 3

Lab Annot. cruciferin 3
Mapman: 33.1 development.storage proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G28520.1 11Arabidopsis thaliana0389100100147 (100)S
AT4G28520.2 11Arabidopsis thaliana0396999942 (34)S
AT4G28520.5 11Arabidopsis thaliana039695950 (0)S
Os02g15090.1 7Oryza sativa4E-6335634510 (0)S
Os02g14600.1 7Oryza sativa2E-5739132510 (0)S
Os01g55690.1 7Oryza sativa3E-5740032494 (4)S
GRMZM2G174883_P01 3.21Zea mays6E-2419432550 (0)S
Zm00001eb267120_P002 agpv5Zea mays6E-2419432550 (0)S
v1_GRMZM2G174883_P01 4a53Zea mays6E-2419432550 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cupin_1(3) Cupin_2(3)
TargetP: Secreted (Class 1 C0.007; M0.149; S0.962; _0.007)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 396 aa (-cTP 372)
Molecular Weight 43.88 kDA(-cTP )
PI 6.46(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
2171Detail       leaf [A. thaliana] stroma Clp gst against clpF stroma
2172Detail       leaf [A. thaliana] stroma Clp gst against clpF/clpS1 stroma
2210Detail       leaf [A. thaliana] total leaf tissue Clp P5 strepII st28
2219Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2236Detail       seedlings [A. thaliana] total tissue gfs9
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2239Detail       seedlings [A. thaliana] total tissue gfs9
2242Detail       seedlings [A. thaliana] total tissue gfs9
2243Detail       seedlings [A. thaliana] total tissue gfs9
2244Detail       seedlings [A. thaliana] total tissue gfs9
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2269Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2274Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
17293592(total seedlings û light and dark grown)
18599647(seed proteome)
18814325(cotyledons)
20118269(developing seeds)
19334764(plasma membrane (cell culture))
20702726(mature seeds)
20516081(tagged-26S proteasome-affinity)
19292762(Ubiquitin-affinity seedling (10 d))
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


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