PPDB

The Plant Proteome Database

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AT4G28480.1   DNAJ heat shock family protein

Lab Annot. J-domain protein DjB2 (type 2)
Mapman: 26.29* misc.DnaJ domain with unknown function
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20560.1 11Arabidopsis thaliana034883885 (5)_
AT4G28480.2 11Arabidopsis thaliana0348798036 (7)_
AT5G01390.1 11Arabidopsis thaliana2E-16534866786 (5)_
Os05g48810.1 7Oryza sativa2E-16536471810 (0)_
Os01g13760.1 7Oryza sativa1E-15335464760 (0)_
Os02g20394.1 7Oryza sativa2E-15335865772 (2)_
Zm00001eb343630_P001 agpv5Zea mays1E-17435572820 (0)_
GRMZM2G119316_P02 3.21Zea mays7E-17435572820 (0)M
v1_GRMZM2G119316_P02 4a53Zea mays7E-17435572820 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DnaJ(1) DnaJ_C(1) KGK(2) RPT(1)
TargetP: Cytoplasm (Class 2 C0.051; M0.198; S0.091; _0.922)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 348 aa (-cTP 266)
Molecular Weight 38.19 kDA(-cTP )
PI 8.92(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
311Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-his6
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2301Detail        [A. thaliana] Clp C1 TRAP
2302Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help