PPDB

The Plant Proteome Database

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AT4G28450.1   WD repeat and SOF domain-containing protein 1

Lab Annot. nucleotide binding;protein binding
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G02730.1 11Arabidopsis thaliana2E-1630825440 (0)_
AT5G25150.1 11Arabidopsis thaliana8E-1124825430 (0)_
AT5G25150.2 11Arabidopsis thaliana9E-1124825430 (0)_
Os01g13730.1 7Oryza sativa045274860 (0)_
Os07g38430.1 7Oryza sativa4E-1334522420 (0)C
Os11g38170.2 7Oryza sativa2E-1131522420 (0)_
v1_GRMZM2G176559_P01 4a53Zea mays0452718515 (15)_
GRMZM2G590033_P01 3.21Zea mays045271850 (0)_
Zm00001eb064830_P001 agpv5Zea mays045271850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(4) eIF2A(2) Sof1(1) VID27(1) WD40(5)
TargetP: Cytoplasm (Class 4 C0.068; M0.452; S0.017; _0.670)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 452 aa (-cTP 442)
Molecular Weight 51.36 kDA(-cTP )
PI 9.51(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help