PPDB

PPDB	The Plant Proteome Database

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AT4G28430.1 Reticulon family protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G20590.1 11 Arabidopsis thaliana 1E-145 405 61 71 0 (0) C
AT2G20590.3 11 Arabidopsis thaliana 1E-140 405 59 69 0 (0) C
AT2G20590.2 11 Arabidopsis thaliana 4E-112 349 59 69 0 (0) C
Os02g19990.2 7 Oryza sativa 3E-72 392 39 58 0 (0) _
Os02g19990.1 7 Oryza sativa 2E-70 393 39 58 0 (0) _
Os08g17870.1 7 Oryza sativa 4E-30 326 27 42 2 (2) M
Zm00001eb203140_P002 agpv5 Zea mays 8E-70 237 45 69 0 (0) _
Zm00001eb203140_P004 agpv5 Zea mays 8E-70 237 45 69 0 (0) _
v1_GRMZM2G109159_P01 4a53 Zea mays 8E-70 237 45 69 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Calpain_u2(2) Connexin(3) DUF2956(2) MAP17(2) Reticulon(1) SID-1_RNA_chan(2)
TargetP:	Chloroplast (Class 3 C0.739; M0.103; S0.001; _0.160)
Predotar:
Subcel. Location:	Thylakoid membrane
TM-HMM prediction:	3 TMs
Aramemnon:	4 TMs
TAT position:
Length	457 aa (-cTP 367) (-lTP 363)
Molecular Weight	51.42 kDA(-cTP 41.51)(-lTP 41.17)
PI	9.80(-cTP 9.51)(-lTP 9.563)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data