PPDB

PPDB	The Plant Proteome Database

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AT4G28370.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G28370.2 11 Arabidopsis thaliana 0 562 100 100 0 (0) S
AT4G28370.3 11 Arabidopsis thaliana 0 562 100 100 0 (0) S
AT4G28370.4 11 Arabidopsis thaliana 0 562 100 100 0 (0) S
Os07g31850.1 7 Oryza sativa 0 520 73 84 0 (0) M
Os07g43740.1 7 Oryza sativa 2E-08 52 44 53 0 (0) S
Os09g06770.1 7 Oryza sativa 1E-07 56 35 55 0 (0) S
Zm00001eb322160_P003 agpv5 Zea mays 0 520 73 84 0 (0) S
Zm00001eb322160_P002 agpv5 Zea mays 0 415 76 86 0 (0) _
Zm00001eb322160_P001 agpv5 Zea mays 0 363 80 89 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2921(2) FANCL_C(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4
TargetP:	Secreted (Class 2 C0.003; M0.089; S0.863; _0.081)
Predotar:
Subcel. Location:
TM-HMM prediction:	5 TMs
Aramemnon:	5 TMs
TAT position:
Length	562 aa (-cTP 535)
Molecular Weight	64.60 kDA(-cTP )
PI	8.40(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data