PPDB

PPDB	The Plant Proteome Database

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AT4G28220.1 NAD(P)H dehydrogenase B1

Lab Annot.

NDB1 (NAD(P)H DEHYDROGENASE B1) dually targeted mitochondria & peroxisome
Mapman: 9.2.2 mitochondrial electron transport / ATP synthesis.NADH-DH_type II.external

Curated Location

mitochondria (Pubmed: 18703057 )
peroxisome (Pubmed: 18703057 )

TAIR curated location: extrinsic to mitochondrial inner membrane16258072

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G28220.2 11 Arabidopsis thaliana 0 504 100 100 0 (0) M
AT4G21490.1 11 Arabidopsis thaliana 0 572 64 79 0 (0) _
AT4G21490.2 11 Arabidopsis thaliana 0 572 64 79 0 (0) _
Os06g47000.1 7 Oryza sativa 0 575 65 81 0 (0) M
Os06g47000.2 7 Oryza sativa 0 575 65 81 0 (0) M
Os05g26660.1 7 Oryza sativa 0 574 59 78 0 (0) M
v1_GRMZM2G322328_P02 4a53 Zea mays 0 562 64 80 3 (3) M
Zm00001eb151430_P001 agpv5 Zea mays 0 575 60 78 0 (0) M
GRMZM2G563190_P02 3.21 Zea mays 0 575 60 78 2 (2) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Av_adeno_fibre(1) EF-hand_1(1) EF-hand_5(1) EF-hand_6(1) EF-hand_7(1) NAD_bindin
TargetP:	Mitochondria (Class 2 C0.011; M0.880; S0.150; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	571 aa (-cTP 559)
Molecular Weight	63.31 kDA(-cTP )
PI	6.27(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1619	Detail								[A. thaliana]		m48
1620	Detail								[A. thaliana]		m48
2286	Detail								[A. thaliana]		Clp C1 WT
2290	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21311031(mitochondria)

Comparative Proteomics Data