PPDB

The Plant Proteome Database

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AT4G28100.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G18050.1 11Arabidopsis thaliana2E-5931238550 (0)S
Os07g37156.1 7Oryza sativa2E-9227858700 (0)S
Os02g48094.1 7Oryza sativa4E-3028533470 (0)M
Os06g30210.1 7Oryza sativa1E-0725525390 (0)S
GRMZM2G041645_P01 3.21Zea mays1E-8826455680 (0)C
v1_GRMZM2G041645_P01 4a53Zea mays1E-8826455680 (0)C
Zm00001eb324000_P001 agpv5Zea mays4E-8726455680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SPARK(1) TALPID3(1)
TargetP: Secreted (Class 1 C0.025; M0.034; S0.957; _0.010)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 304 aa (-cTP 269)
Molecular Weight 33.10 kDA(-cTP )
PI 8.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

14517339(GPI anchored suspension cells)
WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help