PPDB

PPDB	The Plant Proteome Database

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AT4G27880.1 Protein with RING/U-box and TRAF-like domain

Lab Annot.

Protein with RING/U-box and TRAF-like domains
Mapman: 33.99 development.unspecified

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G61790.1 11 Arabidopsis thaliana 0 331 76 83 0 (0) _
AT3G58040.1 11 Arabidopsis thaliana 3E-161 266 78 86 0 (0) _
AT3G58040.3 11 Arabidopsis thaliana 3E-161 266 78 86 0 (0) _
Os02g19140.1 7 Oryza sativa 0 271 89 94 0 (0) _
Os05g14860.1 7 Oryza sativa 0 271 87 94 0 (0) _
Os01g13370.1 7 Oryza sativa 0 269 86 93 0 (0) _
Zm00001eb237020_P001 agpv5 Zea mays 0 341 75 82 0 (0) _
v1_GRMZM2G081075_P01 4a53 Zea mays 0 341 75 82 0 (0) _
GRMZM2G081075_P01 3.21 Zea mays 0 341 75 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DZR(2) Sina(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-RING_2(1) zf-RING_4(1)
TargetP:	Cytoplasm (Class 1 C0.120; M0.065; S0.039; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	327 aa (-cTP 289)
Molecular Weight	36.57 kDA(-cTP )
PI	6.75(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data